PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01206.2.p
Common NameLOC105967475, MIMGU_mgv1a011170mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 283aa    MW: 30240.2 Da    PI: 5.9368
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01206.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY635e-20160209259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s+fp        ++C+vkk++ers++dp+vv++tYeg+H h+
  Migut.L01206.2.p 160 EDGYRWRKYGQKAVKNSPFP--------SKCTVKKRIERSSDDPSVVITTYEGQHCHH 209
                       8*******************........5799***********************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-22145209IPR003657WRKY domain
SuperFamilySSF1182905.1E-19151209IPR003657WRKY domain
PROSITE profilePS5081120.69154211IPR003657WRKY domain
SMARTSM007741.0E-24159210IPR003657WRKY domain
PfamPF031063.3E-14160209IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MAGPEKADPE LNAESTWELG CPDAASHDYF FASDYRESTI LSEFGWNIPV ADSSGVCGCD  60
GGFVIGSDLI EHDLADSSAH RSSTVADASI LASPSNQSLS SSSSHEDPPE KSITTSVSSA  120
AAANSPSDTA TKSSKTTTGQ KRIQQPRFAF VTKSEVDLLE DGYRWRKYGQ KAVKNSPFPS  180
KCTVKKRIER SSDDPSVVIT TYEGQHCHHS TGSYRTTLQD NIPFSRFLLS PSNNPQVLHD  240
SMPIAQSPPS VQGHHHTAAG QEPPPPLGLL GDIVRPPGMR NG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-191522081074Probable WRKY transcription factor 4
2lex_A2e-191522081074Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00067PBMTransfer from AT1G69310Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847527.10.0PREDICTED: probable WRKY transcription factor 57 isoform X2
TrEMBLA0A022QQS30.0A0A022QQS3_ERYGU; Uncharacterized protein
STRINGSolyc05g012500.2.17e-59(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-39WRKY DNA-binding protein 57